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As discussed in the comments the solution, in most cases, is to add the field storage to the config/install folder of the module specifying persist_with_no_fields: true.
core/modules/block_content/config/install/field.storage.block_content.body.yml
langcode: en
status: true
dependencies:
module:
- block_content
- text
id: block_content.body
...
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